Publications
2013
» Raj VS, Mou H, Smits SL, Dekkers DH#, Müller MA, Dijkman R, Muth D, Demmers JA#, Zaki A, Fouchier RA, Thiel V, Drosten C, Rottier PJ, Osterhaus AD, Bosch BJ, Haagmans BL (2013) Dipeptidyl peptidase 4 is a functional receptor for the emerging human coronavirus-EMC. Nature 495(7440):251-4. doi: 10.1038/nature12005.» Papageorgiou DN, Demmers J#, Strouboulis J. (2013) NP-40 reduces contamination by endogenous biotinylated carboxylases during purification of biotin tagged nuclear proteins. Protein Expr Purif 89(1):80-3. doi: 10.1016/j.pep.2013.02.015.
» Van Spronsen M, Mikhaylova M, Lipka J, Schlager MA, van den Heuvel DJ, Kuijpers M, Wulf PS, Keijzer N, Demmers J#, Kapitein LC, Jaarsma D, Gerritsen HC, Akhmanova A, Hoogenraad CC (2013) TRAK/Milton Motor-Adaptor Proteins Steer Mitochondrial Trafficking to Axons and Dendrites. Neuron 77(3):485-502. doi: 10.1016/j.neuron.2012.11.027.
» Kuster DW, Sequeira V, Najafi A, Boontje NM, Wijnker PJ, Witjas-Paalberends ER, Marston SB, Dos Remedios CG, Carrier L, Demmers JA#, Redwood C, Sadayappan S, van der Velden J (2013) GSK3β Phosphorylates Newly Identified Site in the Proline-Alanine-Rich Region of Cardiac Myosin-Binding Protein C and Alters Cross-Bridge Cycling Kinetics in Human. Circ Res 112(4):633-9. doi: 10.1161/CIRCRESAHA.112.275602.
2012
» Tavares L, Dimitrova E, Oxley D, Webster J, Poot R, Demmers J#, Bezstarosti K#, Taylor S, Ura H, Koide H, Wutz A, Vidal M, Elderkin S, Brockdorff N (2012) RYBP-PRC1 Complexes Mediate H2A Ubiquitylation at Polycomb Target Sites Independently of PRC2 and H3K27me3. Cell 148(4):664-78.» Schwertman P, Lagarou A, Dekkers DH#, Raams A, van der Hoek AC, Laffeber C, Hoeijmakers JH, Demmers JA#, Fousteri M, Vermeulen W, Marteijn JA (2012) UV-sensitive syndrome protein UVSSA recruits USP7 to regulate transcription-coupled repair. Nat Genet 44:598–602. doi:10.1038/ng.2230.
» Mohd-Sarip A, Lagarou A, Doyen CM, van der Knaap JA, Aslan U, Bezstarosti K#, Yassin Y, Brock HW, Demmers JA#, Verrijzer CP (2012) Transcription-Independent Function of Polycomb Group Protein PSC in Cell Cycle Control. Science 336(6082):744-747. doi:10.1126/science.1215927
» Cristina Gontan, Eskeatnaf Mulugeta Achame, Jeroen Demmers, Tahsin Stefan Barakat, Eveline Rentmeester, Wilfred van IJcken, J. Anton Grootegoed & Joost Gribnau (2012) RNF12 initiates X-chromosome inactivation by targeting REX1 for degradation. Nature, doi:10.1038/nature11070.
» de Graaff E, Maat P, Hulsenboom E, van den Berg R, van den Bent M, Demmers J, Lugtenburg PJ, Hoogenraad CC, Sillevis Smitt P (2012) Identification of delta/notch-like epidermal growth factor-related receptor as the Tr antigen in paraneoplastic cerebellar degeneration. Ann Neurol, doi: 10.1002/ana.23550.
» Brazão TF, Demmers J, van Ijcken W, Strouboulis J, Fornerod M, Romão L, Grosveld FG (2012) A new function of ROD1 in nonsense-mediated mRNA decay. FEBS Lett 24;586(8):1101-1110.
» Karen Sap# & Jeroen AA Demmers# (2012) Labeling Methods in Mass Spectrometry Based Quantitative Proteomics. In H.C. Leung (Ed.) Integrative Proteomics (pp. 111-132). InTech Open Access publishers, ISBN 978-953-51-0070-6.
» McDonel P, Demmers J#, Tan DW, Watt F, Hendrich BD (2012) Sin3a is essential for the genome integrity and viability of pluripotent cells. Dev Biol 363(1):62-73.
» Moshkin YM, Chalkley GE, Kan TW, Reddy BA, Ozgur Z, van Ijcken WF, Dekkers DH#, Demmers JA#, Travers AA, Verrijzer CP (2012) Remodelers organize cellular chromatin by counteracting intrinsic histone-DNA sequence preferences in a class-specific manner. Mol Cell Biol 32(3):675-88.
» Talens S, Lebbink JH, Malfliet JJ, Demmers JA#, Uitte de Willige S, Leebeek FW, Rijken DC (2012) Binding of carboxypeptidase N to fibrinogen and fibrin. Biochem Biophys Res Commun 427(2):421-5. doi: 10.1016/j.bbrc.2012.09.081.
» Splinter D, Razafsky DS, Schlager MA, Serra-Marques A, Grigoriev I, Demmers J#, Keijzer N, Jiang K, Poser I, Hyman AA, Hoogenraad CC, King SJ, Akhmanova A (2012) BICD2, dynactin, and LIS1 cooperate in regulating dynein recruitment to cellular structures. Mol Biol Cell 23(21):4226-41. doi: 10.1091/mbc.E12-03-0210.
» Jiang K, Toedt G, Montenegro Gouveia S, Davey NE, Hua S, van der Vaart B, Grigoriev I, Larsen J, Pedersen LB, Bezstarosti K#, Lince-Faria M, Demmers J#, Steinmetz MO, Gibson TJ, Akhmanova A (2012) A Proteome-wide screen for mammalian SxIP motif-containing microtubule plus-end tracking proteins. Curr Biol 22(19):1800-7. doi: 10.1016/j.cub.2012.07.047.
» Fanis P, Gillemans N, Aghajanirefah A, Pourfarzad F, Demmers J#, Esteghamat F, Vadlamudi RK, Grosveld F, Philipsen S, van Dijk TB (2012) Five friends of methylated chromatin target of protein-arginine-methyltransferase[prmt]-1 (chtop), a complex linking arginine methylation to desumoylation. Mol Cell Proteomics 11(11):1263-73. doi: 10.1074/mcp.M112.017194.
» Talens S, Leebeek FW, Demmers JA#, Rijken DC (2012) Identification of fibrin clot-bound plasma proteins. PLoS One 7(8):e41966. doi: 10.1371/journal.pone.0041966.
» Van Riel B, Pakozdi T, Brouwer R, Monteiro R, Tuladhar K, Franke V, Bryne JC, Jorna R, Rijkers EJ, van Ijcken W, Andrieu-Soler C, Demmers J#, Patient R, Soler E, Lenhard B, Grosveld F (2012) A novel complex, RUNX1-MYEF2, represses hematopoietic genes in erythroid cells. Mol Cell Biol 32(19):3814-22. doi: 10.1128/MCB.05938-11.
» Twigt J, Steegers-Theunissen RP, Bezstarosti K#, Demmers JA# (2012) Proteomic analysis of the microenvironment of developing oocytes. Proteomics 12(9):1463-71. doi: 10.1002/pmic.201100240.
2011
» Soler E, Andrieu-Soler C, Boer E, Bryne JC, Thongjuea S, Rijkers E#, Demmers J#, Ijcken W, Grosveld F (2011) A systems approach to analyze transcription factors in mammalian cells. Methods 53(2):151-62.» Casanova M, Preissner T, Cerase A, Poot R, Yamada D, Li X, Appanah R, Bezstarosti K#, Demmers J#, Koseki H, Brockdorff N. Polycomblike 2 facilitates the recruitment of PRC2 Polycomb group complexes to the inactive X chromosome and to target loci in embryonic stem cells. Development [Epub ahead of print]
» Engelen E, Akinci U, Bryne JC, Hou J, Gontan C, Moen M, Szumska D, Kockx C, van Ijcken W, Dekkers DH#, Demmers J#, Rijkers EJ#, Bhattacharya S, Philipsen S, Pevny LH, Grosveld FG, Rottier RJ, Lenhard B, Poot RA (2011) Sox2 cooperates with Chd7 to regulate genes that are mutated in human syndromes. Nat Genet 43(6):607-11.
» Grigoriev I, Yu KL, Martinez-Sanchez E, Serra-Marques A, Smal I, Meijering E, Demmers J#, Peränen J, Pasterkamp RJ, van der Sluijs P, Hoogenraad CC, Akhmanova A (2011) Rab6, Rab8, and MICAL3 Cooperate in Controlling Docking and Fusion of Exocytotic Carriers. Curr Biol 21(11):967-74.
» Esteghamat F, van Dijk TB, Braun H, Dekker S, van der Linden R, Hou J, Fanis P, Demmers J#, van Ijcken W, Ozgur Z, Horos R, Pourfarzad F, von Lindern M, Philipsen S (2011) The DNA binding factor Hmg20b is a repressor of erythroid differentiation. Haematologica [Epub ahead of print]
» Meenhuis A, van Veelen PA, de Looper H, van Boxtel N, van den Berge IJ, Sun SM, Taskesen E, Stern P, de Ru AH, van Adrichem AJ, Demmers J#, Jongen-Lavrencic M, Löwenberg B, Touw IP, Sharp PA, Erkeland SJ (2011) MiR-17/20/93/106 promote hematopoietic cell expansion by targeting sequestosome 1-regulated pathways in mice. Blood [Epub ahead of print]
» Kapitein LC, Yau KW, Gouveia SM, van der Zwan WA, Wulf PS, Keijzer N, Demmers J#, Jaworski J, Akhmanova A, Hoogenraad CC (2011) NMDA Receptor Activation Suppresses Microtubule Growth and Spine Entry. J Neurosci 31(22):8194-209.
» Van der Vaart B, Manatschal C, Grigoriev I, Olieric V, Gouveia SM, Bjelic S, Demmers J#, Vorobjev I, Hoogenraad CC, Steinmetz MO, Akhmanova A (2011) SLAIN2 links microtubule plus end-tracking proteins and controls microtubule growth in interphase. J Cell Biol 193(6):1083-99.
» Cui S, Kolodziej K, Obara N, Amaral-Psarris A, Demmers J#, Shi L, Engel JD, Grosveld F, Strouboulis J, Tanabe O (2011) Nuclear Receptors TR2 and TR4 Recruit Multiple Epigenetic Transcriptional Co-repressors that Associate Specifically with the Embryonic {beta}-type Globin Promoters in Differentiated Adult Erythroid Cells. Mol Cell Biol [Epub ahead of print]
» Leotoing L, Chereau F, Baron S, Hube F, Valencia HJ, Bordereaux D, Demmers JA#, Strouboulis J, Baud V (2011) A20-binding inhibitor of nuclear factor-kappaB (NF-kappaB)-2 (ABIN-2) is an activator of inhibitor of NF-kappaB (IkappaB) kinase alpha (IKKalpha)-mediated NF-kappaB transcriptional activity. J Biol Chem 286(37):32277-88.
» Alves RD, Demmers JA#, Bezstarosti K#, van der Eerden BC, Verhaar JA, Eijken M, van Leeuwen JP (2011) Unraveling the human bone microenvironment beyond the classical extracellular matrix proteins: a human bone protein library. J Proteome Res 10(10):4725-33.
» Domingues I, Rino J, Demmers JA#, de Lanerolle P, Santos SC (2011) VEGFR2 translocates to the nucleus to regulate its own transcription. PLoS One 6(9):e25668.
2010
» Karel Bezstarosti*#, Alireza Ghamari*, Frank G. Grosveld, Jeroen A. A. Demmers#. Differential proteomics based on 18O labeling to determine the Cyclin Dependent Kinase 9 interactome. J Proteome Res 9(9):4464-75.» Reddy BA, Bajpe PK, Bassett A, Moshkin YM, Kozhevnikova E, Bezstarosti K#, Demmers JA#, Travers AA, Verrijzer CP. Drosophila Transcription Factor Tramtrack69 Binds MEP1 to Recruit the Chromatin Remodeler NuRD. Mol Cell Biol 30(21):5234-44.
» David Landeira, Stephan Sauer, Raymond Poot, Maria Dvorkina, Luca Mazzarella, Helle F. Jørgensen, C. Filipe Pereira, Marion Leleu, Francesco M. Piccolo, Mikhail Spivakov, Emily Brookes, Ana Pombo, Cynthia Fisher, William C. Skarnes, Tim Snoek, Karel Bezstarosti#, Jeroen Demmers#, Robert J. Klose, Miguel Casanova, Ligia Tavares, Neil Brockdorff, Matthias Merkenschlager & Amanda G. Fisher. Jarid2 is a PRC2 component in embryonic stem cells required for multi-lineage differentiation and recruitment of PRC1 and RNA Polymerase II to developmental regulators. Nat Cell Biol, 12(6):618-24.
» Arnaud Krebs, Jeroen Demmers#, Krishanpal Karmodiya, Nan-Chi Chang, Alice Chien Chang, László Tora. ATAC and Mediator coactivators form a stable complex to regulate a set of non-coding RNA genes. EMBO Rep 11(7):541-7.
» van den Berg DL, Snoek T, Mullin NP, Yates A, Bezstarosti K#, Demmers J#, Chambers I, Poot RA. An Oct4-centered protein interaction network in embryonic stem cells. Cell Stem Cell 6(4):369-81.
» Daniël Splinter, Marvin E. Tanenbaum, Arne Lindqvist, Dick Jaarsma, Annette Flotho, Ka Lou Yu, Ilya Grigoriev, Dieuwke Engelsma, Elize D. Haasdijk, Nanda Keijzer, Jeroen Demmers#, Maarten Fornerod, Frauke Melchior, Casper C. Hoogenraad, René H. Medema & Anna Akhmanova. Bicaudal D2, Dynein, and Kinesin-1 Associate with Nuclear Pore Complexes and Regulte Centrosome and Nuclear Positioning during Mitotic Entry. PLoS Biology 8(4): e1000350. doi:10.1371/journal.pbio.1000350.
» van Dijk TB, Gillemans N, Stein C, Fanis P, Demmers J#, van de Corput M, Essers J, Grosveld F, Bauer UM, Philipsen S. Friend of Prmt1, a novel chromatin target of protein arginine methyltransferases. Mol Cell Biol 30(1):260-72.
Van de Nobelen S, Rosa-Garrido M, Leers J, Heath H, Soochit W, Joosen L, Jonkers I, Demmers J#, van der Reijden M, Torrano V, Grosveld F, Delgado MD, Renkawitz R, Galjart N, Sleutels F. CTCF regulates the local epigenetic state of ribosomal DNA repeats. Epigenetics Chromatin 3(1):19.
Kubben N, Voncken JW, Demmers J#, Calis C, van Almen G, Pinto Y, Misteli T. Identification of differential protein interactors of lamin A and progerin. Nucleus 1(6):513-525.
2009
» J. Jaworski, L.C. Kapitein, S.M. Gouveia, B.R. Dortland, P.S. Wulf, I. Grigoriev, P. Camera, S.A. Spangler, P. Di Stefano, J. Demmers#, H. Krugers, P. Defilippi, A. Akhmanova, and C.C. Hoogenraad (2009) Dynamic Microtubules Regulate Dendritic Spine Morphology and Synaptic Plasticity. Neuron 61: 85-100.» Gontan C, Güttler T, Engelen E, Demmers J#, Fornerod M, Grosveld FG, Tibboel D, Görlich D, Poot RA, Rottier RJ. (2009) Exportin 4 mediates a novel nuclear import pathway for Sox family transcription factors. J Cell Biol 185: 27-34.
» Niessen, HEC, Demmers, JAA# & Voncken, JW (2009) Talking to chromatin: post-translational modulation of polycomb group function. Epigenetics & Chromatin 2:10.
» Yuri M Moshkin, Tsung Wai Kan, Henry Goodfellow, Karel Bezstarosti#, Robert K Maeda, Maxim Pilyugin, Francois Karch, Sarah Bray, Jeroen A. A Demmers# & Peter Verrijzer (2009) Histone Chaperone ASF1 Cooperates with a LID/KDM5 Histone H3K4me2/3 Demethylase Complex to Mediate Gene-Selective Silencing. Mol Cell, 35(6):782-93.
» Maxim Pilyugin, Jeroen Demmers#, Peter C. Verrijzer, Francois Karch, and Yuri M. Moshkin (2009) Phosphorylation-mediated control of histone chaperone ASF1 levels by Tousled-like kinases. PLoS ONE 4(12):e8328.
» Wong HY, Demmers JA#, Bezstarosti K#, Grootegoed JA, Brinkmann AO (2009) DNA dependent recruitment of DDX17 and other interacting proteins by the human androgen receptor. Biochim Biophys Acta 1794(2):193-8.
2008
» B. R. Prashanth Kumar, Jan A. van der Knaap, Jeroen A. A. Demmers#, Karel Bezstarosti#, Helen van Beusekom, Andrew A. Travers and C. Peter Verrijzer (2008) Ubiquitin Protease 64 Controls Cell Fate Through Stabilization of the Transcriptional Repressor Tramtrack. Mol Cell Biol 28: 1606-15.» Dekkers DH#, Bezstarosti K#, Gurusamy N, Luijk K, Verhoeven AJ, Rijkers EJ#, Demmers JA#, Lamers JM, Maulik N, Das DK (2008) Identification by a differential proteomic approach of the induced stress and redox proteins by resveratrol in the normal and diabetic rat hearts. J Cell Mol Med, 12(5A):1677-89.
» Ilya Grigoriev, Susana Montenegro Gouveia, Babet van der Vaart, Jeroen Demmers#, Jeremy T. Smyth, Srinivas Honnappa, Daniël Splinter, Michel O. Steinmetz, James W. Putney, Jr, Casper C. Hoogenraad and Anna Akhmanova (2008) STIM1 is a microtubule plus end tracking protein involved in remodeling of the endoplasmic reticulum. Curr Biol 18: 177-82.
» Gillian E. Chalkley, Yuri M. Moshkin, Karin Langenberg, Karel Bezstarosti#, Andras Blastyak, Henrik Gyurkovics, Jeroen A. A. Demmers#, and C. Peter Verrijzer (2008) The Transcriptional Co-activator SAYP is a Trithorax Group Signature Subunit of the PBAP Chromatin Remodeling Complex. Mol Cell Biol 28: 2920-9.
» Debbie L. C. van den Berg, Wensheng Zhang, Adam Yates, Erik Engelen, Katalin Takacs, Karel Bezstarosti#, Jeroen Demmers#, Ian Chambers, Raymond A. Poot (2008) The Estrogen Related Receptor Beta interacts with Oct4 to positively regulate Nanog gene expression. Mol Cell Biol 28: 5986-95.
» Anna Lagarou, Adone Mohd-Sarip, Yuri M. Moshkin, Gillian E. Chalkley, Karel Bezstarosti#, Jeroen A. A. Demmers#, and C. Peter Verrijzer (2008) dKDM2 couples histone H2A ubiquitylation to histone H3 demethylation during Polycomb group silencing. Genes Dev 22: 2799-810.
2007
» Carmen Sánchez, Inés Sánchez, Jeroen A. A. Demmers# , Patrick Rodriguez, John Strouboulis & Miguel Vidal (2007) Proteomic analysis of RING1B / RNF2 interactors identifies a novel complex with the FBXL10 / JMJD1B histone demethylase and the BCOR corepressor. Mol Cell Proteomics 6: 820-34.» Ilya Grigoriev, Daniël Splinter, Nanda Keijzer, Phebe S. Wulf, Jeroen Demmers# , Toshihisa Ohtsuka, Mauro Modesti, Ivan V. Maly, Frank Grosveld, Casper C. Hoogenraad and Anna Akhmanova (2007) Rab6 regulates transport and targeting of exocytotic carriers. Dev Cell 13: 305-14.
» Eva Teuling, Suaad Ahmed, Elize Haasdijk, Jeroen Demmers#, Michel O Steinmetz, Anna Akhmanova, Dick Jaarsma and Casper Hoogenraad (2007) Motor neuron disease-associated mutant VAPB recruits wild type VAPs into tubular aggregates and perturbs FFAT binding. J Neurosci 27: 9801-01.
» Mauro Modesti, Magda Budzowska, Céline Baldeyron, Jeroen Demmers#, Rodolfo Ghirlando and Roland Kanaar (2007) RAD51AP1 is a structure-specific DNA binding protein that stimulates joint molecule formation during RAD51-mediated homologous recombination. Mol Cell 28: 468-481.